STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KB13_1282TonB-dependent siderophore receptor; [H] COG4206 Outer membrane cobalamin receptor protein. (689 aa)    
Predicted Functional Partners:
KB13_7
[P] COG1629 Outer membrane receptor proteins, mostly Fe transport.
  
  
 0.791
KB13_260
2OG-Fe(II) oxygenase family enzyme.
  
  
 0.682
KB13_1287
[P] COG1629 Outer membrane receptor proteins, mostly Fe transport.
  
  
 0.593
KB13_856
Peptidase M48, Ste24p; [O] COG0501 Zn-dependent protease with chaperone function.
  
     0.588
KB13_498
Peptidase M48, Ste24p; [R] COG4783 Putative Zn-dependent protease, contains TPR repeats.
  
     0.574
hslO
Chaperonin HslO; [O] COG1281 Disulfide bond chaperones of the HSP33 family.
       0.560
KB13_186
Putative TonB-dependent receptor; [P] COG1629 Outer membrane receptor proteins, mostly Fe transport.
  
   
 0.540
KB13_978
[MU] COG1538 Outer membrane protein.
  
 
   0.476
Your Current Organism:
beta proteobacterium KB13
NCBI taxonomy Id: 314607
Other names: b. proteobacterium KB13
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.