KB13_18 protein (beta proteobacterium KB13) - STRING interaction network

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KB13_18

RecB family exonuclease, hypothetical; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit. (829 aa)

Predicted Functional Partners:

KB13_140

0.974

KB13_406

0.781

greB

0.566

KB13_997

0.566

efp

0.484

coq7

0.465

KB13_30

0.457

Your Current Organism:

beta proteobacterium KB13

NCBI taxonomy Id: 314607
Other names: b. proteobacterium KB13

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
KB13_140	KB13_18	KB13_140	KB13_18	UvrD/REP helicase, putative; [L] COG0210 Superfamily I DNA and RNA helicases; Belongs to the helicase family. UvrD subfamily.	RecB family exonuclease, hypothetical; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.	0.974
KB13_140	KB13_406	KB13_140	KB13_406	UvrD/REP helicase, putative; [L] COG0210 Superfamily I DNA and RNA helicases; Belongs to the helicase family. UvrD subfamily.	[L] COG1074 ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains).	0.846
KB13_140	KB13_997	KB13_140	KB13_997	UvrD/REP helicase, putative; [L] COG0210 Superfamily I DNA and RNA helicases; Belongs to the helicase family. UvrD subfamily.	Hypothetical cytosolic protein; [S] COG4394 Uncharacterized protein conserved in bacteria.	0.566
KB13_140	coq7	KB13_140	KB13_283	UvrD/REP helicase, putative; [L] COG0210 Superfamily I DNA and RNA helicases; Belongs to the helicase family. UvrD subfamily.	Ubiquinone biosynthesis protein COQ7; Catalyzes the hydroxylation of 2-nonaprenyl-3-methyl-6- methoxy-1,4-benzoquinol during ubiquinone biosynthesis.	0.405
KB13_140	efp	KB13_140	KB13_182	UvrD/REP helicase, putative; [L] COG0210 Superfamily I DNA and RNA helicases; Belongs to the helicase family. UvrD subfamily.	Translation elongation factor P; Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase.	0.484
KB13_140	greB	KB13_140	KB13_976	UvrD/REP helicase, putative; [L] COG0210 Superfamily I DNA and RNA helicases; Belongs to the helicase family. UvrD subfamily.	Transcription elongation factor GreB; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreB releases sequences of up to 9 nucleotides in length.	0.566
KB13_18	KB13_140	KB13_18	KB13_140	RecB family exonuclease, hypothetical; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.	UvrD/REP helicase, putative; [L] COG0210 Superfamily I DNA and RNA helicases; Belongs to the helicase family. UvrD subfamily.	0.974
KB13_18	KB13_30	KB13_18	KB13_30	RecB family exonuclease, hypothetical; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.	[S] COG1322 Uncharacterized protein conserved in bacteria.	0.457
KB13_18	KB13_406	KB13_18	KB13_406	RecB family exonuclease, hypothetical; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.	[L] COG1074 ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains).	0.781
KB13_18	KB13_997	KB13_18	KB13_997	RecB family exonuclease, hypothetical; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.	Hypothetical cytosolic protein; [S] COG4394 Uncharacterized protein conserved in bacteria.	0.566
KB13_18	coq7	KB13_18	KB13_283	RecB family exonuclease, hypothetical; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.	Ubiquinone biosynthesis protein COQ7; Catalyzes the hydroxylation of 2-nonaprenyl-3-methyl-6- methoxy-1,4-benzoquinol during ubiquinone biosynthesis.	0.465
KB13_18	efp	KB13_18	KB13_182	RecB family exonuclease, hypothetical; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.	Translation elongation factor P; Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase.	0.484
KB13_18	greB	KB13_18	KB13_976	RecB family exonuclease, hypothetical; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.	Transcription elongation factor GreB; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreB releases sequences of up to 9 nucleotides in length.	0.566
KB13_30	KB13_18	KB13_30	KB13_18	[S] COG1322 Uncharacterized protein conserved in bacteria.	RecB family exonuclease, hypothetical; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.	0.457
KB13_406	KB13_140	KB13_406	KB13_140	[L] COG1074 ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains).	UvrD/REP helicase, putative; [L] COG0210 Superfamily I DNA and RNA helicases; Belongs to the helicase family. UvrD subfamily.	0.846
KB13_406	KB13_18	KB13_406	KB13_18	[L] COG1074 ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains).	RecB family exonuclease, hypothetical; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.	0.781
KB13_997	KB13_140	KB13_997	KB13_140	Hypothetical cytosolic protein; [S] COG4394 Uncharacterized protein conserved in bacteria.	UvrD/REP helicase, putative; [L] COG0210 Superfamily I DNA and RNA helicases; Belongs to the helicase family. UvrD subfamily.	0.566
KB13_997	KB13_18	KB13_997	KB13_18	Hypothetical cytosolic protein; [S] COG4394 Uncharacterized protein conserved in bacteria.	RecB family exonuclease, hypothetical; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit.	0.566
KB13_997	efp	KB13_997	KB13_182	Hypothetical cytosolic protein; [S] COG4394 Uncharacterized protein conserved in bacteria.	Translation elongation factor P; Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase.	0.990
KB13_997	greB	KB13_997	KB13_976	Hypothetical cytosolic protein; [S] COG4394 Uncharacterized protein conserved in bacteria.	Transcription elongation factor GreB; Necessary for efficient RNA polymerase transcription elongation past template-encoded arresting sites. The arresting sites in DNA have the property of trapping a certain fraction of elongating RNA polymerases that pass through, resulting in locked ternary complexes. Cleavage of the nascent transcript by cleavage factors such as GreA or GreB allows the resumption of elongation from the new 3'terminus. GreB releases sequences of up to 9 nucleotides in length.	0.787