STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KB13_26Hemagglutination activity domain protein; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit. (4206 aa)    
Predicted Functional Partners:
KB13_267
Polypeptide-transport-associated domain protein, ShlB-type, putative; [U] COG2831 Hemolysin activation/secretion protein.
 
 0.983
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
    
  0.680
KB13_546
OmpA/MotB; [M] COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins.
  
 
 0.649
KB13_944
Cobyrinic Acid a,c-diamide synthase; [D] COG0455 ATPases involved in chromosome partitioning.
  
    0.635
KB13_36
Chromosome segregation DNA-binding protein; [K] COG1475 Predicted transcriptional regulators; Belongs to the ParB family.
       0.631
cmk
[F] COG0283 Cytidylate kinase.
   
 
  0.566
nadC
[H] COG0157 Nicotinate-nucleotide pyrophosphorylase; Belongs to the NadC/ModD family.
    
  0.566
tolB
Tol-Pal system beta propeller repeat protein TolB; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
    
  0.562
tmk
Thymidylate kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family.
   
 
  0.561
KB13_278
Deoxyadenosine kinase, putative; [F] COG1428 Deoxynucleoside kinases.
   
 
  0.478
Your Current Organism:
beta proteobacterium KB13
NCBI taxonomy Id: 314607
Other names: b. proteobacterium KB13
Server load: low (34%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.