xth_2 protein (beta proteobacterium KB13) - STRING interaction network

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Predicted Interactions

gene neighborhood

gene fusions

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co-expression

protein homology

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[Homology]

Score

xth_2

[L] COG0708 Exonuclease III. (256 aa)

Predicted Functional Partners:

nth

0.980

polA

0.930

dnaN

0.929

mutY

0.899

KB13_457

0.894

KB13_490

0.835

prlC

0.792

KB13_1238

0.790

ptsP

0.773

xth_1

0.682

Your Current Organism:

beta proteobacterium KB13

NCBI taxonomy Id: 314607
Other names: b. proteobacterium KB13

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
KB13_1238	mutY	KB13_1238	KB13_917	[H] COG0340 Biotin-(acetyl-CoA carboxylase) ligase.	A/G-specific adenine glycosylase; Adenine glycosylase active on G-A mispairs.	0.471
KB13_1238	xth_1	KB13_1238	KB13_428	[H] COG0340 Biotin-(acetyl-CoA carboxylase) ligase.	[L] COG0708 Exonuclease III.	0.790
KB13_1238	xth_2	KB13_1238	KB13_292	[H] COG0340 Biotin-(acetyl-CoA carboxylase) ligase.	[L] COG0708 Exonuclease III.	0.790
KB13_457	nth	KB13_457	KB13_768	[L] COG0122 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase.	Endonuclease III; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate.	0.501
KB13_457	polA	KB13_457	KB13_1229	[L] COG0122 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase.	DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.	0.560
KB13_457	xth_1	KB13_457	KB13_428	[L] COG0122 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase.	[L] COG0708 Exonuclease III.	0.894
KB13_457	xth_2	KB13_457	KB13_292	[L] COG0122 3-methyladenine DNA glycosylase/8-oxoguanine DNA glycosylase.	[L] COG0708 Exonuclease III.	0.894
KB13_490	dnaN	KB13_490	KB13_1152	[L] COG2812 DNA polymerase III, gamma/tau subunits.	[L] COG0592 DNA polymerase sliding clamp subunit (PCNA homolog).	0.999
KB13_490	polA	KB13_490	KB13_1229	[L] COG2812 DNA polymerase III, gamma/tau subunits.	DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.	0.975
KB13_490	xth_1	KB13_490	KB13_428	[L] COG2812 DNA polymerase III, gamma/tau subunits.	[L] COG0708 Exonuclease III.	0.835
KB13_490	xth_2	KB13_490	KB13_292	[L] COG2812 DNA polymerase III, gamma/tau subunits.	[L] COG0708 Exonuclease III.	0.835
dnaN	KB13_490	KB13_1152	KB13_490	[L] COG0592 DNA polymerase sliding clamp subunit (PCNA homolog).	[L] COG2812 DNA polymerase III, gamma/tau subunits.	0.999
dnaN	mutY	KB13_1152	KB13_917	[L] COG0592 DNA polymerase sliding clamp subunit (PCNA homolog).	A/G-specific adenine glycosylase; Adenine glycosylase active on G-A mispairs.	0.600
dnaN	polA	KB13_1152	KB13_1229	[L] COG0592 DNA polymerase sliding clamp subunit (PCNA homolog).	DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.	0.999
dnaN	xth_1	KB13_1152	KB13_428	[L] COG0592 DNA polymerase sliding clamp subunit (PCNA homolog).	[L] COG0708 Exonuclease III.	0.915
dnaN	xth_2	KB13_1152	KB13_292	[L] COG0592 DNA polymerase sliding clamp subunit (PCNA homolog).	[L] COG0708 Exonuclease III.	0.929
mutY	KB13_1238	KB13_917	KB13_1238	A/G-specific adenine glycosylase; Adenine glycosylase active on G-A mispairs.	[H] COG0340 Biotin-(acetyl-CoA carboxylase) ligase.	0.471
mutY	dnaN	KB13_917	KB13_1152	A/G-specific adenine glycosylase; Adenine glycosylase active on G-A mispairs.	[L] COG0592 DNA polymerase sliding clamp subunit (PCNA homolog).	0.600
mutY	nth	KB13_917	KB13_768	A/G-specific adenine glycosylase; Adenine glycosylase active on G-A mispairs.	Endonuclease III; DNA repair enzyme that has both DNA N-glycosylase activity and AP-lyase activity. The DNA N-glycosylase activity releases various damaged pyrimidines from DNA by cleaving the N-glycosidic bond, leaving an AP (apurinic/apyrimidinic) site. The AP-lyase activity cleaves the phosphodiester bond 3' to the AP site by a beta-elimination, leaving a 3'-terminal unsaturated sugar and a product with a terminal 5'- phosphate.	0.783
mutY	xth_1	KB13_917	KB13_428	A/G-specific adenine glycosylase; Adenine glycosylase active on G-A mispairs.	[L] COG0708 Exonuclease III.	0.899