Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
KB13_382Hypothetical protein. (214 aa)    
Predicted Functional Partners:
KB13_1275
Methyltransferase type 11; [R] COG4798 Predicted methyltransferase.
       0.746
KB13_1123
Hypothetical protein.
       0.543
KB13_852
Hypothetical protein.
       0.493
KB13_452
Hypothetical protein.
       0.418
htpX
Heat shock protein HtpX; [O] COG0501 Zn-dependent protease with chaperone function; Belongs to the peptidase M48B family.
       0.418
Your Current Organism:
beta proteobacterium KB13
NCBI taxonomy Id: 314607
Other names: b. proteobacterium KB13
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