STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KB13_4253-hexulose-6-phosphate isomerase; [K] COG1737 Transcriptional regulators. (179 aa)    
Predicted Functional Partners:
hxlA
3-hexulose-6-phosphate synthase; [F] COG0284 Orotidine-5'-phosphate decarboxylase.
 
 0.998
pabB
[EH] COG0147 Anthranilate/para-aminobenzoate synthases component I.
       0.590
pgi
[G] COG0166 Glucose-6-phosphate isomerase; Belongs to the GPI family.
    
 0.586
tkt
Transketolase; Catalyzes the transfer of a two-carbon ketol group from a ketose donor to an aldose acceptor, via a covalent intermediate with the cofactor thiamine pyrophosphate.
     
 0.570
tal
Transaldolase; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway.
  
 
 0.491
gltB
Glutamate synthase, large subunit; [E] COG0070 Glutamate synthase domain 3.
     
 0.435
Your Current Organism:
beta proteobacterium KB13
NCBI taxonomy Id: 314607
Other names: b. proteobacterium KB13
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