rplU protein (beta proteobacterium KB13) - STRING interaction network

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rplU

Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family. (104 aa)

Predicted Functional Partners:

rpmA

0.998

rplS

0.996

rplL

0.993

rpmF

0.993

rplT

0.992

rplC

0.992

rplI

0.992

rplM

0.991

rpsR

0.990

rplX

0.990

Your Current Organism:

beta proteobacterium KB13

NCBI taxonomy Id: 314607
Other names: b. proteobacterium KB13

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
rplC	rplI	KB13_834	KB13_936	Ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	Ribosomal protein L9; Binds to the 23S rRNA.	0.993
rplC	rplL	KB13_834	KB13_1148	Ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	Ribosomal protein L7/L12; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family.	0.994
rplC	rplM	KB13_834	KB13_552	Ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	0.997
rplC	rplS	KB13_834	KB13_687	Ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	50S ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.	0.988
rplC	rplT	KB13_834	KB13_1209	Ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	Ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.	0.992
rplC	rplU	KB13_834	KB13_435	Ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.992
rplC	rplX	KB13_834	KB13_1042	Ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	Ribosomal protein L24; One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit.	0.996
rplC	rpmA	KB13_834	KB13_461	Ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	[J] COG0211 Ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family.	0.989
rplC	rpmF	KB13_834	KB13_73	Ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	[J] COG0333 Ribosomal protein L32; Belongs to the bacterial ribosomal protein bL32 family.	0.972
rplC	rpsR	KB13_834	KB13_101	Ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	Ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family.	0.990
rplI	rplC	KB13_936	KB13_834	Ribosomal protein L9; Binds to the 23S rRNA.	Ribosomal protein L3; One of the primary rRNA binding proteins, it binds directly near the 3'-end of the 23S rRNA, where it nucleates assembly of the 50S subunit.	0.993
rplI	rplL	KB13_936	KB13_1148	Ribosomal protein L9; Binds to the 23S rRNA.	Ribosomal protein L7/L12; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family.	0.993
rplI	rplM	KB13_936	KB13_552	Ribosomal protein L9; Binds to the 23S rRNA.	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	0.990
rplI	rplS	KB13_936	KB13_687	Ribosomal protein L9; Binds to the 23S rRNA.	50S ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.	0.993
rplI	rplT	KB13_936	KB13_1209	Ribosomal protein L9; Binds to the 23S rRNA.	Ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.	0.993
rplI	rplU	KB13_936	KB13_435	Ribosomal protein L9; Binds to the 23S rRNA.	Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.992
rplI	rplX	KB13_936	KB13_1042	Ribosomal protein L9; Binds to the 23S rRNA.	Ribosomal protein L24; One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit.	0.983
rplI	rpmA	KB13_936	KB13_461	Ribosomal protein L9; Binds to the 23S rRNA.	[J] COG0211 Ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family.	0.984
rplI	rpmF	KB13_936	KB13_73	Ribosomal protein L9; Binds to the 23S rRNA.	[J] COG0333 Ribosomal protein L32; Belongs to the bacterial ribosomal protein bL32 family.	0.976
rplI	rpsR	KB13_936	KB13_101	Ribosomal protein L9; Binds to the 23S rRNA.	Ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit; Belongs to the bacterial ribosomal protein bS18 family.	0.999