rpsU protein (beta proteobacterium KB13) - STRING interaction network

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rpsU

[J] COG0828 Ribosomal protein S21; Belongs to the bacterial ribosomal protein bS21 family. (70 aa)

Predicted Functional Partners:

rpsT

0.988

rplU

0.987

rpsP

0.985

KB13_195

0.984

rpsO

0.983

rpsL

0.981

rplS

0.980

rpmI

0.980

rpsB

0.979

rplM

0.979

Your Current Organism:

beta proteobacterium KB13

NCBI taxonomy Id: 314607
Other names: b. proteobacterium KB13

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
KB13_195	rplM	KB13_195	KB13_552	Conserved hypothetical protein; [J] COG0227 Ribosomal protein L28.	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	0.988
KB13_195	rplS	KB13_195	KB13_687	Conserved hypothetical protein; [J] COG0227 Ribosomal protein L28.	50S ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.	0.985
KB13_195	rplU	KB13_195	KB13_435	Conserved hypothetical protein; [J] COG0227 Ribosomal protein L28.	Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.990
KB13_195	rpmI	KB13_195	KB13_83	Conserved hypothetical protein; [J] COG0227 Ribosomal protein L28.	[J] COG0291 Ribosomal protein L35; Belongs to the bacterial ribosomal protein bL35 family.	0.985
KB13_195	rpsB	KB13_195	KB13_173	Conserved hypothetical protein; [J] COG0227 Ribosomal protein L28.	[J] COG0052 Ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family.	0.982
KB13_195	rpsL	KB13_195	KB13_1210	Conserved hypothetical protein; [J] COG0227 Ribosomal protein L28.	Ribosomal protein S12; Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit.	0.987
KB13_195	rpsO	KB13_195	KB13_841	Conserved hypothetical protein; [J] COG0227 Ribosomal protein L28.	Ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.	0.985
KB13_195	rpsP	KB13_195	KB13_398	Conserved hypothetical protein; [J] COG0227 Ribosomal protein L28.	[J] COG2058 Ribosomal protein L12E/L44/L45/RPP1/RPP2; Belongs to the bacterial ribosomal protein bS16 family.	0.981
KB13_195	rpsT	KB13_195	KB13_1122	Conserved hypothetical protein; [J] COG0227 Ribosomal protein L28.	Ribosomal protein S20; Binds directly to 16S ribosomal RNA.	0.990
KB13_195	rpsU	KB13_195	KB13_686	Conserved hypothetical protein; [J] COG0227 Ribosomal protein L28.	[J] COG0828 Ribosomal protein S21; Belongs to the bacterial ribosomal protein bS21 family.	0.984
rplM	KB13_195	KB13_552	KB13_195	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Conserved hypothetical protein; [J] COG0227 Ribosomal protein L28.	0.988
rplM	rplS	KB13_552	KB13_687	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	50S ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site.	0.991
rplM	rplU	KB13_552	KB13_435	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.991
rplM	rpmI	KB13_552	KB13_83	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	[J] COG0291 Ribosomal protein L35; Belongs to the bacterial ribosomal protein bL35 family.	0.989
rplM	rpsB	KB13_552	KB13_173	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	[J] COG0052 Ribosomal protein S2; Belongs to the universal ribosomal protein uS2 family.	0.992
rplM	rpsL	KB13_552	KB13_1210	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Ribosomal protein S12; Interacts with and stabilizes bases of the 16S rRNA that are involved in tRNA selection in the A site and with the mRNA backbone. Located at the interface of the 30S and 50S subunits, it traverses the body of the 30S subunit contacting proteins on the other side and probably holding the rRNA structure together. The combined cluster of proteins S8, S12 and S17 appears to hold together the shoulder and platform of the 30S subunit.	0.992
rplM	rpsO	KB13_552	KB13_841	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Ribosomal protein S15; Forms an intersubunit bridge (bridge B4) with the 23S rRNA of the 50S subunit in the ribosome.	0.986
rplM	rpsP	KB13_552	KB13_398	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	[J] COG2058 Ribosomal protein L12E/L44/L45/RPP1/RPP2; Belongs to the bacterial ribosomal protein bS16 family.	0.989
rplM	rpsT	KB13_552	KB13_1122	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	Ribosomal protein S20; Binds directly to 16S ribosomal RNA.	0.990
rplM	rpsU	KB13_552	KB13_686	Ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	[J] COG0828 Ribosomal protein S21; Belongs to the bacterial ribosomal protein bS21 family.	0.979