Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KB13_772Maf-like protein; [D] COG0424 Nucleotide-binding protein implicated in inhibition of septum formation; Belongs to the Maf family. (176 aa)    
Predicted Functional Partners:
KB13_803
uroporphyrin-III C/tetrapyrrole (Corrin/Porphyri n) methyltransferase; [R] COG0313 Predicted methyltransferases.
  
    0.833
KB13_1242
Mannose-1-phosphate guanyltransferase, putative; [M] COG1209 dTDP-glucose pyrophosphorylase.
     
  0.745
oadA
[I] COG4770 Acetyl/propionyl-CoA carboxylase, alpha subunit.
       0.675
tmk
Thymidylate kinase; Phosphorylation of dTMP to form dTDP in both de novo and salvage pathways of dTTP synthesis; Belongs to the thymidylate kinase family.
    
  0.659
accC_1
acetyl-CoA carboxylase, biotin carboxylase; This protein is a component of the acetyl coenzyme A carboxylase complex; first, biotin carboxylase catalyzes the carboxylation of the carrier protein and then the transcarboxylase transfers the carboxyl group to form malonyl-CoA.
       0.628
KB13_611
Lytic transglycosylase, catalytic; [M] COG0741 Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains).
    
  0.576
KB13_1125
[H] COG0352 Thiamine monophosphate synthase.
    
  0.561
cyaK
[T] COG2114 Adenylate cyclase, family 3 (some proteins contain HAMP domain).
    
  0.555
cmk
[F] COG0283 Cytidylate kinase.
    
  0.534
ndk
Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family.
    
  0.534
Your Current Organism:
beta proteobacterium KB13
NCBI taxonomy Id: 314607
Other names: b. proteobacterium KB13
Server load: low (12%) [HD]