STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KB13_845[R] COG0546 Predicted phosphatases. (213 aa)    
Predicted Functional Partners:
KB13_317
[P] COG0607 Rhodanese-related sulfurtransferase; Belongs to the UPF0176 family.
       0.773
KB13_702
Oxidoreductase, Gfo/Idh/MocA family; [R] COG0673 Predicted dehydrogenases and related proteins.
       0.773
KB13_777
Oxidoreductase, FAD-binding; [C] COG0247 Fe-S oxidoreductase.
    
 0.768
KB13_1198
P-protein; [E] COG1605 Chorismate mutase.
    
  0.674
KB13_215
[R] COG0637 Predicted phosphatase/phosphohexomutase.
  
  
 
0.665
KB13_916
HAD-superfamily hydrolase; [R] COG0546 Predicted phosphatases.
  
  
 
0.650
ndk
Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family.
       0.549
KB13_571
Phosphoglycolate phosphatase, putative; [R] COG0546 Predicted phosphatases.
  
  
 
0.500
purL
Phosphoribosylformylglycinamidine synthase; Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate.
     
 0.447
Your Current Organism:
beta proteobacterium KB13
NCBI taxonomy Id: 314607
Other names: b. proteobacterium KB13
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