STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KB13_888Sulphur oxidation protein SoxZ; [K] COG5665 CCR4-NOT transcriptional regulation complex, NOT5 subunit. (257 aa)    
Predicted Functional Partners:
KB13_377
Cytochrome c, class I.
 
  
 0.822
KB13_964
Putative Cytochrome c subfamily protein.
 
  
 0.821
cysD
[EH] COG0175 3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase and related enzymes.
     
 0.801
KB13_324
Metallo-beta-lactamase family protein; [R] COG0491 Zn-dependent hydrolases, including glyoxylases.
 
     0.793
KB13_38
Methanol dehydrogenase subunit 1; [S] COG1520 FOG: WD40-like repeat.
 
     0.793
KB13_696
MxaD.
  
     0.774
KB13_1076
Von Willebrand factor, type A.
  
     0.768
KB13_1239
Hypothetical protein; [S] COG3391 Uncharacterized conserved protein; WD-40 repeat.
 
     0.764
KB13_322
Von Willebrand factor, type A; [R] COG2304 Uncharacterized protein containing a von Willebrand factor type A (vWA) domain.
  
     0.761
KB13_1162
Hypothetical protein; [S] COG3391 Uncharacterized conserved protein; 40-residue yvtn beta-propeller repeat.
  
     0.757
Your Current Organism:
beta proteobacterium KB13
NCBI taxonomy Id: 314607
Other names: b. proteobacterium KB13
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.