Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
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textmining
Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
dacB[M] COG2027 D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4). (460 aa)    
Predicted Functional Partners:
KB13_222
Peptidoglycan synthetase FtsI; [M] COG0768 Cell division protein FtsI/penicillin-binding protein 2.
     
 0.827
mrcA
MrcA penicillin-binding 1 (peptidoglycan synthetase) transmembrane protein; [M] COG0768 Cell division protein FtsI/penicillin-binding protein 2.
     
 0.824
bioA
Adenosylmethionine-8-amino-7-oxononanoate transaminase; [E] COG4992 Ornithine/acetylornithine aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
       0.817
mrdA
Penicillin-binding protein 2; [M] COG0768 Cell division protein FtsI/penicillin-binding protein 2.
     
 0.813
KB13_516
[R] COG4989 Predicted oxidoreductase.
       0.773
KB13_1108
OsmC family protein; [O] COG1765 Predicted redox protein, regulator of disulfide bond formation.
       0.727
fkpA
[O] COG1047 FKBP-type peptidyl-prolyl cis-trans isomerases 2.
       0.727
mtgA
Monofunctional biosynthetic peptidoglycan transglycosylase; Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors. Belongs to the glycosyltransferase 51 family.
  
  
 0.693
KB13_422
[R] COG0666 FOG: Ankyrin repeat.
    
 
 0.656
KB13_726
Ankyrin repeat protein.
    
   0.651
Your Current Organism:
beta proteobacterium KB13
NCBI taxonomy Id: 314607
Other names: b. proteobacterium KB13
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