Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| KB13_1084 | KB13_176 | KB13_1084 | KB13_176 | ABC transporter, ATP-binding protein; [G] COG3839 ABC-type sugar transport systems, ATPase components. | ABC transporter ATP-binding protein; [V] COG1131 ABC-type multidrug transport system, ATPase component. | 0.802 |
| KB13_1084 | msbA | KB13_1084 | KB13_968 | ABC transporter, ATP-binding protein; [G] COG3839 ABC-type sugar transport systems, ATPase components. | Lipid A export permease/ATP-binding protein MsbA; Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation. | 0.902 |
| KB13_1185 | KB13_1189 | KB13_1185 | KB13_1189 | [U] COG0848 Biopolymer transport protein. | MotA/TolQ/ExbB proton channel; [U] COG0811 Biopolymer transport proteins. | 0.992 |
| KB13_1185 | kdsB | KB13_1185 | KB13_418 | [U] COG0848 Biopolymer transport protein. | 3-deoxy-D-manno-octulosonate cytidylyltransferase; [M] COG1861 Spore coat polysaccharide biosynthesis protein F, CMP-KDO synthetase homolog; Belongs to the KdsB family. | 0.792 |
| KB13_1185 | lpxK_1 | KB13_1185 | KB13_433 | [U] COG0848 Biopolymer transport protein. | tetraacyldisaccharide-1-P 4-kinase; [S] COG2835 Uncharacterized conserved protein; Belongs to the UPF0434 family. | 0.792 |
| KB13_1185 | lpxK_2 | KB13_1185 | KB13_825 | [U] COG0848 Biopolymer transport protein. | Tetraacyldisaccharide 4'-kinase; Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1-P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA). | 0.792 |
| KB13_1185 | msbA | KB13_1185 | KB13_968 | [U] COG0848 Biopolymer transport protein. | Lipid A export permease/ATP-binding protein MsbA; Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation. | 0.773 |
| KB13_1189 | KB13_1185 | KB13_1189 | KB13_1185 | MotA/TolQ/ExbB proton channel; [U] COG0811 Biopolymer transport proteins. | [U] COG0848 Biopolymer transport protein. | 0.992 |
| KB13_1189 | kdsB | KB13_1189 | KB13_418 | MotA/TolQ/ExbB proton channel; [U] COG0811 Biopolymer transport proteins. | 3-deoxy-D-manno-octulosonate cytidylyltransferase; [M] COG1861 Spore coat polysaccharide biosynthesis protein F, CMP-KDO synthetase homolog; Belongs to the KdsB family. | 0.849 |
| KB13_1189 | lpxK_1 | KB13_1189 | KB13_433 | MotA/TolQ/ExbB proton channel; [U] COG0811 Biopolymer transport proteins. | tetraacyldisaccharide-1-P 4-kinase; [S] COG2835 Uncharacterized conserved protein; Belongs to the UPF0434 family. | 0.792 |
| KB13_1189 | lpxK_2 | KB13_1189 | KB13_825 | MotA/TolQ/ExbB proton channel; [U] COG0811 Biopolymer transport proteins. | Tetraacyldisaccharide 4'-kinase; Transfers the gamma-phosphate of ATP to the 4'-position of a tetraacyldisaccharide 1-phosphate intermediate (termed DS-1-P) to form tetraacyldisaccharide 1,4'-bis-phosphate (lipid IVA). | 0.851 |
| KB13_1189 | msbA | KB13_1189 | KB13_968 | MotA/TolQ/ExbB proton channel; [U] COG0811 Biopolymer transport proteins. | Lipid A export permease/ATP-binding protein MsbA; Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation. | 0.773 |
| KB13_176 | KB13_1084 | KB13_176 | KB13_1084 | ABC transporter ATP-binding protein; [V] COG1131 ABC-type multidrug transport system, ATPase component. | ABC transporter, ATP-binding protein; [G] COG3839 ABC-type sugar transport systems, ATPase components. | 0.802 |
| KB13_176 | dppD | KB13_176 | KB13_758 | ABC transporter ATP-binding protein; [V] COG1131 ABC-type multidrug transport system, ATPase component. | [R] COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase; Belongs to the ABC transporter superfamily. | 0.899 |
| KB13_176 | msbA | KB13_176 | KB13_968 | ABC transporter ATP-binding protein; [V] COG1131 ABC-type multidrug transport system, ATPase component. | Lipid A export permease/ATP-binding protein MsbA; Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation. | 0.842 |
| KB13_526 | msbA | KB13_526 | KB13_968 | [R] COG0790 FOG: TPR repeat, SEL1 subfamily. | Lipid A export permease/ATP-binding protein MsbA; Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation. | 0.835 |
| KB13_800 | msbA | KB13_800 | KB13_968 | ABC transporter, ATP-binding protein; [V] COG1131 ABC-type multidrug transport system, ATPase component. | Lipid A export permease/ATP-binding protein MsbA; Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation. | 0.793 |
| dppD | KB13_176 | KB13_758 | KB13_176 | [R] COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase; Belongs to the ABC transporter superfamily. | ABC transporter ATP-binding protein; [V] COG1131 ABC-type multidrug transport system, ATPase component. | 0.899 |
| dppD | msbA | KB13_758 | KB13_968 | [R] COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase; Belongs to the ABC transporter superfamily. | Lipid A export permease/ATP-binding protein MsbA; Involved in lipid A export and possibly also in glycerophospholipid export and for biogenesis of the outer membrane. Transmembrane domains (TMD) form a pore in the inner membrane and the ATP-binding domain (NBD) is responsible for energy generation. | 0.775 |
| kdsB | KB13_1185 | KB13_418 | KB13_1185 | 3-deoxy-D-manno-octulosonate cytidylyltransferase; [M] COG1861 Spore coat polysaccharide biosynthesis protein F, CMP-KDO synthetase homolog; Belongs to the KdsB family. | [U] COG0848 Biopolymer transport protein. | 0.792 |
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