STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDP99865.1ParB family protein; COG1475 Predicted transcriptional regulators; Belongs to the ParB family. (297 aa)    
Predicted Functional Partners:
EDP99864.1
ParA family protein; COG1192 ATPases involved in chromosome partitioning.
 
 
 0.980
EDP98978.1
ParA family protein; COG1192 ATPases involved in chromosome partitioning.
 
 
 0.921
EDQ00903.1
Chromosome partitioning ParA family protein; COG1192 ATPases involved in chromosome partitioning.
 
 
 0.919
EDQ00670.1
ParA family protein; COG1192 ATPases involved in chromosome partitioning.
 
 
 0.919
rsmG
Glucose-inhibited division protein B; Specifically methylates the N7 position of guanine in position 527 of 16S rRNA.
  
  
 0.878
EDP98783.1
Cell division protein FtsK, putative; COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins.
  
   
 0.832
dnaA
Chromosomal replication initiation protein; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids.
 
  
 0.702
EDQ01472.1
Hypothetical protein; COG1192 ATPases involved in chromosome partitioning.
  
 
 0.681
EDQ01615.1
Hypothetical protein; COG1192 ATPases involved in chromosome partitioning.
  
 
 0.681
EDP99866.1
COG3312 F0F1-type ATP synthase, subunit I.
 
     0.559
Your Current Organism:
Shewanella benthica
NCBI taxonomy Id: 314608
Other names: S. benthica KT99, Shewanella benthica KT99, Shewanella benthica str. KT99, Shewanella benthica strain KT99
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.