Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
CusRCOG0745 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain. (225 aa)    
Predicted Functional Partners:
EDQ01386.1
COG0642 Signal transduction histidine kinase.
 
 
 0.958
EDQ01529.1
Two-component hybrid sensor and regulator; COG0642 Signal transduction histidine kinase.
 
 
 0.956
EDQ01277.1
Hypothetical protein.
  
 
 0.846
EDQ00410.1
Hypothetical protein.
  
 
 0.819
BarA
Sensor histidine kinase/response regulator; COG0642 Signal transduction histidine kinase.
 
 
 0.814
EDQ01384.1
COG3212 Predicted membrane protein.
  
    0.809
EDQ02328.1
Sensor protein CpxA; COG0642 Signal transduction histidine kinase.
 
 
 0.806
EDP99481.1
Putative two-component system sensor kinase; COG0642 Signal transduction histidine kinase.
 
 
 0.785
EDQ01748.1
COG0642 Signal transduction histidine kinase.
 
   0.775
EDQ01112.1
Sensor protein RstB, putative; COG0642 Signal transduction histidine kinase.
 
   0.738
Your Current Organism:
Shewanella benthica
NCBI taxonomy Id: 314608
Other names: S. benthica KT99, Shewanella benthica KT99, Shewanella benthica str. KT99, Shewanella benthica strain KT99
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