STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDQ02768.1Putative glutamate synthetase; COG0069 Glutamate synthase domain 2. (270 aa)    
Predicted Functional Partners:
EDQ02769.1
Putative glutamate synthetase.
     0.992
EDQ02767.1
Putative glutamate synthetase; COG0069 Glutamate synthase domain 2.
     0.990
GltD
Glutamate synthase, small subunit; COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductases.
 
 
 0.930
GltB
Glutamate synthase, large subunit; COG0067 Glutamate synthase domain 1.
 
 
0.928
Ldh
COG0334 Glutamate dehydrogenase/leucine dehydrogenase.
  
 
 0.780
YgfK
Putative oxidoreductase, Fe-S subunit; COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductases.
  
 
 0.658
EDQ01703.1
COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductases.
 
 
 0.655
FadH
2,4-dienoyl-CoA reductase FadH; COG1902 NADH:flavin oxidoreductases, Old Yellow Enzyme family.
  
 
 0.642
FadH-2
2,4-dienoyl-CoA reductase, putative; COG1902 NADH:flavin oxidoreductases, Old Yellow Enzyme family.
  
 
 0.642
EDQ02695.1
Formate dehydrogenase, alpha subunit; COG3383 Uncharacterized anaerobic dehydrogenase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family.
  
 
 0.626
Your Current Organism:
Shewanella benthica
NCBI taxonomy Id: 314608
Other names: S. benthica KT99, Shewanella benthica KT99, Shewanella benthica str. KT99, Shewanella benthica strain KT99
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