Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
EDQ00801.1Transcriptional regulator, LysR family protein; COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family. (314 aa)    
Predicted Functional Partners:
EDQ00153.1
Transcriptional regulator, LysR family protein; COG0583 Transcriptional regulator.
  
     0.748
EDQ00199.1
COG0583 Transcriptional regulator.
  
     0.741
EDP98968.1
Transcriptional regulator, LysR family protein; COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.667
EDQ01117.1
COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.663
EDP99052.1
Transcriptional regulator, LysR family protein; COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.659
EDQ01512.1
Transcriptional regulator, LysR family protein; COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.656
EDQ02253.1
COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.648
YdhB
Transcriptional regulator, LysR family protein; COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.531
MetR
Transcriptional activator protein MetR; COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.490
IlvY
COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
  
     0.475
Your Current Organism:
Shewanella benthica
NCBI taxonomy Id: 314608
Other names: S. benthica KT99, Shewanella benthica KT99, Shewanella benthica str. KT99, Shewanella benthica strain KT99
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