Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EDP98740.1 | EDP98741.1 | KT99_11844 | KT99_11849 | Hypothetical protein; COG0609 ABC-type Fe3+-siderophore transport system, permease component. | Cytosolic long-chain acyl-CoA thioester hydrolase family protein; COG1607 Acyl-CoA hydrolase. | 0.519 |
EDP98740.1 | FabF | KT99_11844 | KT99_11839 | Hypothetical protein; COG0609 ABC-type Fe3+-siderophore transport system, permease component. | COG0304 3-oxoacyl-(acyl-carrier-protein) synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | 0.459 |
EDP98741.1 | EDP98740.1 | KT99_11849 | KT99_11844 | Cytosolic long-chain acyl-CoA thioester hydrolase family protein; COG1607 Acyl-CoA hydrolase. | Hypothetical protein; COG0609 ABC-type Fe3+-siderophore transport system, permease component. | 0.519 |
EDP98741.1 | EDP98742.1 | KT99_11849 | KT99_11854 | Cytosolic long-chain acyl-CoA thioester hydrolase family protein; COG1607 Acyl-CoA hydrolase. | 2-hydroxy-3-oxopropionate reductase; COG2084 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases. | 0.569 |
EDP98741.1 | EDQ02051.1 | KT99_11849 | KT99_19664 | Cytosolic long-chain acyl-CoA thioester hydrolase family protein; COG1607 Acyl-CoA hydrolase. | COG0825 Acetyl-CoA carboxylase alpha subunit. | 0.638 |
EDP98741.1 | FabF | KT99_11849 | KT99_11839 | Cytosolic long-chain acyl-CoA thioester hydrolase family protein; COG1607 Acyl-CoA hydrolase. | COG0304 3-oxoacyl-(acyl-carrier-protein) synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | 0.417 |
EDP98742.1 | EDP98741.1 | KT99_11854 | KT99_11849 | 2-hydroxy-3-oxopropionate reductase; COG2084 3-hydroxyisobutyrate dehydrogenase and related beta-hydroxyacid dehydrogenases. | Cytosolic long-chain acyl-CoA thioester hydrolase family protein; COG1607 Acyl-CoA hydrolase. | 0.569 |
EDQ02051.1 | EDP98741.1 | KT99_19664 | KT99_11849 | COG0825 Acetyl-CoA carboxylase alpha subunit. | Cytosolic long-chain acyl-CoA thioester hydrolase family protein; COG1607 Acyl-CoA hydrolase. | 0.638 |
EDQ02051.1 | FabF | KT99_19664 | KT99_11839 | COG0825 Acetyl-CoA carboxylase alpha subunit. | COG0304 3-oxoacyl-(acyl-carrier-protein) synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | 0.998 |
FabF | EDP98740.1 | KT99_11839 | KT99_11844 | COG0304 3-oxoacyl-(acyl-carrier-protein) synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | Hypothetical protein; COG0609 ABC-type Fe3+-siderophore transport system, permease component. | 0.459 |
FabF | EDP98741.1 | KT99_11839 | KT99_11849 | COG0304 3-oxoacyl-(acyl-carrier-protein) synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | Cytosolic long-chain acyl-CoA thioester hydrolase family protein; COG1607 Acyl-CoA hydrolase. | 0.417 |
FabF | EDQ02051.1 | KT99_11839 | KT99_19664 | COG0304 3-oxoacyl-(acyl-carrier-protein) synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family. | COG0825 Acetyl-CoA carboxylase alpha subunit. | 0.998 |