STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TusDdsrE-related protein; COG1553 Uncharacterized conserved protein involved in intracellular sulfur reduction. (129 aa)    
Predicted Functional Partners:
EDP98775.1
COG2923 Uncharacterized protein involved in the oxidation of intracellular sulfur; Belongs to the DsrF/TusC family.
 
 
 0.998
TusE
Hypothetical desulfoviridin gamma subunit; Part of a sulfur-relay system.
 
 
 0.996
DsrH
Hypothetical protein; COG2168 Uncharacterized conserved protein involved in oxidation of intracellular sulfur.
  
 
 0.991
tusA
Hypothetical protein; Sulfur carrier protein which probably makes part of a sulfur- relay system; Belongs to the sulfur carrier protein TusA family.
 
 
 0.969
EDP98895.1
Hypothetical protein; Belongs to the sulfur carrier protein TusA family.
  
 
 0.956
YedF
COG0425 Predicted redox protein, regulator of disulfide bond formation; Belongs to the sulfur carrier protein TusA family.
  
  
 0.546
YccA
COG0670 Integral membrane protein, interacts with FtsH; Belongs to the BI1 family.
       0.536
YciK
Short chain dehydrogenase; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases).
  
     0.471
EDP99692.1
COG1714 Predicted membrane protein/domain.
  
     0.402
Your Current Organism:
Shewanella benthica
NCBI taxonomy Id: 314608
Other names: S. benthica KT99, Shewanella benthica KT99, Shewanella benthica str. KT99, Shewanella benthica strain KT99
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.