STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDQ01500.1Glycosyl transferase, group 1; COG0438 Glycosyltransferase. (410 aa)    
Predicted Functional Partners:
GlgP
Glycogen phosphorylase family protein; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties.
  
 0.927
Pgm
COG0033 Phosphoglucomutase.
   
 0.921
glgC
Glucose-1-phosphate adenylyltransferase; Involved in the biosynthesis of ADP-glucose, a building block required for the elongation reactions to produce glycogen. Catalyzes the reaction between ATP and alpha-D-glucose 1-phosphate (G1P) to produce pyrophosphate and ADP-Glc; Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family.
    
 0.904
GalU
UTP-glucose-1-phosphate uridylyltransferase; COG1210 UDP-glucose pyrophosphorylase.
    
 0.903
GalU-2
Putative UTP-glucose-1-phosphateuridylyltransferase, galU; COG1210 UDP-glucose pyrophosphorylase.
    
 0.903
EDQ01498.1
Glycosyltransferase-like protein; COG0438 Glycosyltransferase.
 
     0.883
EDQ01487.1
Lipopolysaccharide N-acetylglucosaminyltransferase; COG0438 Glycosyltransferase.
 
     0.824
EDQ01501.1
COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins.
  
    0.774
EDQ01499.1
COG2244 Membrane protein involved in the export of O-antigen and teichoic acid.
 
  
 0.741
EDQ01494.1
COG1524 Uncharacterized proteins of the AP superfamily.
 
   
 0.716
Your Current Organism:
Shewanella benthica
NCBI taxonomy Id: 314608
Other names: S. benthica KT99, Shewanella benthica KT99, Shewanella benthica str. KT99, Shewanella benthica strain KT99
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.