Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| EDP99442.1 | EDP99688.1 | KT99_14820 | KT99_13707 | COG3092 Uncharacterized protein conserved in bacteria. | Putative solute/DNA competence effector; RNA chaperone with significant RNA binding, RNA strand exchange and RNA duplexing activities; Belongs to the ProQ family. | 0.771 |
| EDP99442.1 | EDQ02190.1 | KT99_14820 | KT99_12509 | COG3092 Uncharacterized protein conserved in bacteria. | COG3139 Uncharacterized protein conserved in bacteria. | 0.769 |
| EDP99442.1 | FabR | KT99_14820 | KT99_02321 | COG3092 Uncharacterized protein conserved in bacteria. | Transcriptional regulator, TetR family protein; COG1309 Transcriptional regulator. | 0.593 |
| EDP99442.1 | MetJ | KT99_14820 | KT99_19354 | COG3092 Uncharacterized protein conserved in bacteria. | Transcriptional repressor protein MetJ; This regulatory protein, when combined with SAM (S- adenosylmethionine) represses the expression of the methionine regulon and of enzymes involved in SAM synthesis. | 0.757 |
| EDP99442.1 | NlpI | KT99_14820 | KT99_00478 | COG3092 Uncharacterized protein conserved in bacteria. | TPR domain protein; May be involved in cell division. | 0.764 |
| EDP99442.1 | fadR | KT99_14820 | KT99_11043 | COG3092 Uncharacterized protein conserved in bacteria. | Fatty acid metabolism regulator; Multifunctional regulator of fatty acid metabolism. | 0.620 |
| EDP99442.1 | mutH | KT99_14820 | KT99_01409 | COG3092 Uncharacterized protein conserved in bacteria. | DNA mismatch repair protein; Sequence-specific endonuclease that cleaves unmethylated GATC sequences. It is involved in DNA mismatch repair. Belongs to the MutH family. | 0.700 |
| EDP99442.1 | rraB | KT99_14820 | KT99_07988 | COG3092 Uncharacterized protein conserved in bacteria. | Hypothetical protein; Globally modulates RNA abundance by binding to RNase E (Rne) and regulating its endonucleolytic activity. Can modulate Rne action in a substrate-dependent manner by altering the composition of the degradosome. | 0.773 |
| EDP99442.1 | seqA | KT99_14820 | KT99_12419 | COG3092 Uncharacterized protein conserved in bacteria. | seqA protein; Negative regulator of replication initiation, which contributes to regulation of DNA replication and ensures that replication initiation occurs exactly once per chromosome per cell cycle. Binds to pairs of hemimethylated GATC sequences in the oriC region, thus preventing assembly of replication proteins and re- initiation at newly replicated origins. Repression is relieved when the region becomes fully methylated. | 0.727 |
| EDP99688.1 | EDP99442.1 | KT99_13707 | KT99_14820 | Putative solute/DNA competence effector; RNA chaperone with significant RNA binding, RNA strand exchange and RNA duplexing activities; Belongs to the ProQ family. | COG3092 Uncharacterized protein conserved in bacteria. | 0.771 |
| EDP99688.1 | EDQ02190.1 | KT99_13707 | KT99_12509 | Putative solute/DNA competence effector; RNA chaperone with significant RNA binding, RNA strand exchange and RNA duplexing activities; Belongs to the ProQ family. | COG3139 Uncharacterized protein conserved in bacteria. | 0.786 |
| EDP99688.1 | FabR | KT99_13707 | KT99_02321 | Putative solute/DNA competence effector; RNA chaperone with significant RNA binding, RNA strand exchange and RNA duplexing activities; Belongs to the ProQ family. | Transcriptional regulator, TetR family protein; COG1309 Transcriptional regulator. | 0.657 |
| EDP99688.1 | MetJ | KT99_13707 | KT99_19354 | Putative solute/DNA competence effector; RNA chaperone with significant RNA binding, RNA strand exchange and RNA duplexing activities; Belongs to the ProQ family. | Transcriptional repressor protein MetJ; This regulatory protein, when combined with SAM (S- adenosylmethionine) represses the expression of the methionine regulon and of enzymes involved in SAM synthesis. | 0.768 |
| EDP99688.1 | NlpI | KT99_13707 | KT99_00478 | Putative solute/DNA competence effector; RNA chaperone with significant RNA binding, RNA strand exchange and RNA duplexing activities; Belongs to the ProQ family. | TPR domain protein; May be involved in cell division. | 0.788 |
| EDP99688.1 | fadR | KT99_13707 | KT99_11043 | Putative solute/DNA competence effector; RNA chaperone with significant RNA binding, RNA strand exchange and RNA duplexing activities; Belongs to the ProQ family. | Fatty acid metabolism regulator; Multifunctional regulator of fatty acid metabolism. | 0.720 |
| EDP99688.1 | mutH | KT99_13707 | KT99_01409 | Putative solute/DNA competence effector; RNA chaperone with significant RNA binding, RNA strand exchange and RNA duplexing activities; Belongs to the ProQ family. | DNA mismatch repair protein; Sequence-specific endonuclease that cleaves unmethylated GATC sequences. It is involved in DNA mismatch repair. Belongs to the MutH family. | 0.745 |
| EDP99688.1 | rraB | KT99_13707 | KT99_07988 | Putative solute/DNA competence effector; RNA chaperone with significant RNA binding, RNA strand exchange and RNA duplexing activities; Belongs to the ProQ family. | Hypothetical protein; Globally modulates RNA abundance by binding to RNase E (Rne) and regulating its endonucleolytic activity. Can modulate Rne action in a substrate-dependent manner by altering the composition of the degradosome. | 0.774 |
| EDP99688.1 | seqA | KT99_13707 | KT99_12419 | Putative solute/DNA competence effector; RNA chaperone with significant RNA binding, RNA strand exchange and RNA duplexing activities; Belongs to the ProQ family. | seqA protein; Negative regulator of replication initiation, which contributes to regulation of DNA replication and ensures that replication initiation occurs exactly once per chromosome per cell cycle. Binds to pairs of hemimethylated GATC sequences in the oriC region, thus preventing assembly of replication proteins and re- initiation at newly replicated origins. Repression is relieved when the region becomes fully methylated. | 0.780 |
| EDQ02190.1 | EDP99442.1 | KT99_12509 | KT99_14820 | COG3139 Uncharacterized protein conserved in bacteria. | COG3092 Uncharacterized protein conserved in bacteria. | 0.769 |
| EDQ02190.1 | EDP99688.1 | KT99_12509 | KT99_13707 | COG3139 Uncharacterized protein conserved in bacteria. | Putative solute/DNA competence effector; RNA chaperone with significant RNA binding, RNA strand exchange and RNA duplexing activities; Belongs to the ProQ family. | 0.786 |
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