STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
paaIacyl-CoA thioesterase. (144 aa)    
Predicted Functional Partners:
paaK
phenylacetate-CoA ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA).
 
 
 0.994
paaC
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaC.
 
 
 0.985
paaB
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaB.
 
 
 0.984
paaA_1
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaA.
 
 
 0.982
paaD
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaD.
 
 
 0.982
paaE
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE.
 
 
  0.975
paaA_2
1,2-phenylacetyl-CoA epoxidase, catalytic subunit.
 
 
 0.945
paaG_1
2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase.
 
 
 0.909
kstR2
Transcriptional regulator, TetR family.
 
     0.827
paaZ
oxepin-CoA hydrolase / 3-oxo-5,6-dehydrosuberyl-CoA semialdehyde dehydrogenase.
 
 
 0.815
Your Current Organism:
Palleronia marisminoris
NCBI taxonomy Id: 315423
Other names: CECT 7066, LMG 22959, LMG:22959, P. marisminoris, Palleronia marisminoris Martinez-Checa et al. 2005 emend. Albuquerque et al. 2015, strain B33
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