STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFG18709.1Protein of unknown function. (137 aa)    
Predicted Functional Partners:
SFG18682.1
Phage major tail protein, TP901-1 family.
 
 
   0.999
SFG18737.1
Head-tail adaptor.
 
 
   0.999
SFG18765.1
Phage conserved hypothetical protein, phiE125 gp8 family.
 
 
   0.998
SFG18483.1
Putative phage tail protein.
 
 
   0.997
SFG18542.1
Phage conserved hypothetical protein BR0599.
 
 
   0.997
SFG18572.1
TIGR02217 family protein.
 
   0.997
SFG18792.1
Phage major capsid protein, HK97 family.
 
 
   0.995
SFG18851.1
Phage portal protein, HK97 family.
 
 
   0.994
SFG18595.1
Phage tail tape measure protein, lambda family.
 
    0.962
SFG18653.1
Phage tail tube protein, GTA-gp10.
 
     0.959
Your Current Organism:
Palleronia marisminoris
NCBI taxonomy Id: 315423
Other names: CECT 7066, LMG 22959, LMG:22959, P. marisminoris, Palleronia marisminoris Martinez-Checa et al. 2005 emend. Albuquerque et al. 2015, strain B33
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