Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFG27656.1 | SFG27794.1 | SAMN04488020_101726 | SAMN04488020_101730 | Nucleotide-binding universal stress protein, UspA family. | Ectoine hydrolase. | 0.825 |
SFG27656.1 | dctP_1 | SAMN04488020_101726 | SAMN04488020_101723 | Nucleotide-binding universal stress protein, UspA family. | TRAP-type C4-dicarboxylate transport system, substrate-binding protein. | 0.896 |
SFG27656.1 | maiA | SAMN04488020_101726 | SAMN04488020_101727 | Nucleotide-binding universal stress protein, UspA family. | Maleate isomerase. | 0.856 |
SFG27656.1 | rapL_1 | SAMN04488020_101726 | SAMN04488020_101729 | Nucleotide-binding universal stress protein, UspA family. | Ornithine cyclodeaminase. | 0.793 |
SFG27656.1 | siaT_1 | SAMN04488020_101726 | SAMN04488020_101724 | Nucleotide-binding universal stress protein, UspA family. | TRAP-type C4-dicarboxylate transport system, small permease component. | 0.958 |
SFG27656.1 | siaT_2 | SAMN04488020_101726 | SAMN04488020_101725 | Nucleotide-binding universal stress protein, UspA family. | TRAP transporter, DctM subunit. | 0.929 |
SFG27656.1 | tdcB_1 | SAMN04488020_101726 | SAMN04488020_101728 | Nucleotide-binding universal stress protein, UspA family. | Threonine dehydratase. | 0.773 |
SFG27794.1 | SFG27656.1 | SAMN04488020_101730 | SAMN04488020_101726 | Ectoine hydrolase. | Nucleotide-binding universal stress protein, UspA family. | 0.825 |
SFG27794.1 | dctP_1 | SAMN04488020_101730 | SAMN04488020_101723 | Ectoine hydrolase. | TRAP-type C4-dicarboxylate transport system, substrate-binding protein. | 0.707 |
SFG27794.1 | maiA | SAMN04488020_101730 | SAMN04488020_101727 | Ectoine hydrolase. | Maleate isomerase. | 0.936 |
SFG27794.1 | rapL_1 | SAMN04488020_101730 | SAMN04488020_101729 | Ectoine hydrolase. | Ornithine cyclodeaminase. | 0.883 |
SFG27794.1 | siaT_1 | SAMN04488020_101730 | SAMN04488020_101724 | Ectoine hydrolase. | TRAP-type C4-dicarboxylate transport system, small permease component. | 0.869 |
SFG27794.1 | siaT_2 | SAMN04488020_101730 | SAMN04488020_101725 | Ectoine hydrolase. | TRAP transporter, DctM subunit. | 0.850 |
SFG27794.1 | tdcB_1 | SAMN04488020_101730 | SAMN04488020_101728 | Ectoine hydrolase. | Threonine dehydratase. | 0.843 |
dctP_1 | SFG27656.1 | SAMN04488020_101723 | SAMN04488020_101726 | TRAP-type C4-dicarboxylate transport system, substrate-binding protein. | Nucleotide-binding universal stress protein, UspA family. | 0.896 |
dctP_1 | SFG27794.1 | SAMN04488020_101723 | SAMN04488020_101730 | TRAP-type C4-dicarboxylate transport system, substrate-binding protein. | Ectoine hydrolase. | 0.707 |
dctP_1 | maiA | SAMN04488020_101723 | SAMN04488020_101727 | TRAP-type C4-dicarboxylate transport system, substrate-binding protein. | Maleate isomerase. | 0.784 |
dctP_1 | rapL_1 | SAMN04488020_101723 | SAMN04488020_101729 | TRAP-type C4-dicarboxylate transport system, substrate-binding protein. | Ornithine cyclodeaminase. | 0.649 |
dctP_1 | siaT_1 | SAMN04488020_101723 | SAMN04488020_101724 | TRAP-type C4-dicarboxylate transport system, substrate-binding protein. | TRAP-type C4-dicarboxylate transport system, small permease component. | 0.916 |
dctP_1 | siaT_2 | SAMN04488020_101723 | SAMN04488020_101725 | TRAP-type C4-dicarboxylate transport system, substrate-binding protein. | TRAP transporter, DctM subunit. | 0.906 |
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