STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cheY_1Two-component system, chemotaxis family, response regulator CheY. (124 aa)    
Predicted Functional Partners:
rpfC
PAS domain S-box-containing protein.
 
0.998
SFH12473.1
PAS domain S-box-containing protein.
 
0.991
cheA_1
Two-component system, chemotaxis family, sensor kinase CheA.
 0.984
cheW_2
Purine-binding chemotaxis protein CheW.
 
 
 0.967
tsr
Methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor.
 
 0.953
cheW_1
Purine-binding chemotaxis protein CheW.
 
 
 0.947
trg_1
Methyl-accepting chemotaxis protein.
 
  0.944
cheA_2
Two-component system, chemotaxis family, sensor kinase CheA.
 0.935
arcB
Hypothetical protein.
 
 0.926
cheB3
Two-component system, chemotaxis family, CheB/CheR fusion protein.
   
 0.920
Your Current Organism:
Palleronia marisminoris
NCBI taxonomy Id: 315423
Other names: CECT 7066, LMG 22959, LMG:22959, P. marisminoris, Palleronia marisminoris Martinez-Checa et al. 2005 emend. Albuquerque et al. 2015, strain B33
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.