Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFH12473.1 | arcB | SAMN04488020_1074 | SAMN04488020_104158 | PAS domain S-box-containing protein. | Hypothetical protein. | 0.999 |
SFH12473.1 | bphP_1 | SAMN04488020_1074 | SAMN04488020_101178 | PAS domain S-box-containing protein. | Hypothetical protein. | 0.998 |
SFH12473.1 | degS | SAMN04488020_1074 | SAMN04488020_11933 | PAS domain S-box-containing protein. | Signal transduction histidine kinase. | 0.906 |
SFH12473.1 | gmr_2 | SAMN04488020_1074 | SAMN04488020_101199 | PAS domain S-box-containing protein. | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | 0.999 |
SFH12473.1 | liaR_1 | SAMN04488020_1074 | SAMN04488020_10180 | PAS domain S-box-containing protein. | DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains. | 0.911 |
SFH12473.1 | rpfC | SAMN04488020_1074 | SAMN04488020_102186 | PAS domain S-box-containing protein. | PAS domain S-box-containing protein. | 0.999 |
SFH12473.1 | tar | SAMN04488020_1074 | SAMN04488020_102399 | PAS domain S-box-containing protein. | Methyl-accepting chemotaxis protein. | 0.998 |
SFH12473.1 | tsr | SAMN04488020_1074 | SAMN04488020_101296 | PAS domain S-box-containing protein. | Methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor. | 0.996 |
SFH12473.1 | vraR | SAMN04488020_1074 | SAMN04488020_103180 | PAS domain S-box-containing protein. | Two-component system, NarL family, nitrate/nitrite response regulator NarL. | 0.911 |
SFH12473.1 | vraS | SAMN04488020_1074 | SAMN04488020_11630 | PAS domain S-box-containing protein. | Signal transduction histidine kinase. | 0.906 |
arcB | SFH12473.1 | SAMN04488020_104158 | SAMN04488020_1074 | Hypothetical protein. | PAS domain S-box-containing protein. | 0.999 |
arcB | bphP_1 | SAMN04488020_104158 | SAMN04488020_101178 | Hypothetical protein. | Hypothetical protein. | 0.932 |
arcB | gmr_2 | SAMN04488020_104158 | SAMN04488020_101199 | Hypothetical protein. | PAS domain S-box-containing protein/diguanylate cyclase (GGDEF) domain-containing protein. | 0.996 |
arcB | liaR_1 | SAMN04488020_104158 | SAMN04488020_10180 | Hypothetical protein. | DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains. | 0.695 |
arcB | rpfC | SAMN04488020_104158 | SAMN04488020_102186 | Hypothetical protein. | PAS domain S-box-containing protein. | 0.999 |
arcB | tar | SAMN04488020_104158 | SAMN04488020_102399 | Hypothetical protein. | Methyl-accepting chemotaxis protein. | 0.999 |
arcB | tsr | SAMN04488020_104158 | SAMN04488020_101296 | Hypothetical protein. | Methyl-accepting chemotaxis sensory transducer with Pas/Pac sensor. | 0.956 |
arcB | vraR | SAMN04488020_104158 | SAMN04488020_103180 | Hypothetical protein. | Two-component system, NarL family, nitrate/nitrite response regulator NarL. | 0.695 |
bphP_1 | SFH12473.1 | SAMN04488020_101178 | SAMN04488020_1074 | Hypothetical protein. | PAS domain S-box-containing protein. | 0.998 |
bphP_1 | arcB | SAMN04488020_101178 | SAMN04488020_104158 | Hypothetical protein. | Hypothetical protein. | 0.932 |
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