Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFG36636.1 | SFG36663.1 | SAMN04488020_10211 | SAMN04488020_10212 | Hypothetical protein. | Conserved hypothetical protein. | 0.578 |
SFG36663.1 | SFG36636.1 | SAMN04488020_10212 | SAMN04488020_10211 | Conserved hypothetical protein. | Hypothetical protein. | 0.578 |
SFG36663.1 | SFG42122.1 | SAMN04488020_10212 | SAMN04488020_102183 | Conserved hypothetical protein. | Hypothetical protein. | 0.701 |
SFG36663.1 | algA | SAMN04488020_10212 | SAMN04488020_11810 | Conserved hypothetical protein. | Mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase; Belongs to the mannose-6-phosphate isomerase type 2 family. | 0.850 |
SFG36663.1 | eno | SAMN04488020_10212 | SAMN04488020_11046 | Conserved hypothetical protein. | Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family. | 0.569 |
SFG36663.1 | kdsD | SAMN04488020_10212 | SAMN04488020_11471 | Conserved hypothetical protein. | Arabinose-5-phosphate isomerase; Belongs to the SIS family. GutQ/KpsF subfamily. | 0.628 |
SFG36663.1 | metG_1 | SAMN04488020_10212 | SAMN04488020_101604 | Conserved hypothetical protein. | methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation. | 0.571 |
SFG36663.1 | pth | SAMN04488020_10212 | SAMN04488020_102203 | Conserved hypothetical protein. | peptidyl-tRNA hydrolase; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family. | 0.688 |
SFG36663.1 | rpmC | SAMN04488020_10212 | SAMN04488020_10213 | Conserved hypothetical protein. | Large subunit ribosomal protein L29; Belongs to the universal ribosomal protein uL29 family. | 0.563 |
SFG36663.1 | rpsQ | SAMN04488020_10212 | SAMN04488020_10214 | Conserved hypothetical protein. | SSU ribosomal protein S17P; One of the primary rRNA binding proteins, it binds specifically to the 5'-end of 16S ribosomal RNA. | 0.562 |
SFG36663.1 | tpiA | SAMN04488020_10212 | SAMN04488020_101401 | Conserved hypothetical protein. | Triosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family. | 0.570 |
SFG42122.1 | SFG36663.1 | SAMN04488020_102183 | SAMN04488020_10212 | Hypothetical protein. | Conserved hypothetical protein. | 0.701 |
algA | SFG36663.1 | SAMN04488020_11810 | SAMN04488020_10212 | Mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase; Belongs to the mannose-6-phosphate isomerase type 2 family. | Conserved hypothetical protein. | 0.850 |
algA | kdsD | SAMN04488020_11810 | SAMN04488020_11471 | Mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase; Belongs to the mannose-6-phosphate isomerase type 2 family. | Arabinose-5-phosphate isomerase; Belongs to the SIS family. GutQ/KpsF subfamily. | 0.426 |
algA | tpiA | SAMN04488020_11810 | SAMN04488020_101401 | Mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase; Belongs to the mannose-6-phosphate isomerase type 2 family. | Triosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family. | 0.520 |
eno | SFG36663.1 | SAMN04488020_11046 | SAMN04488020_10212 | Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family. | Conserved hypothetical protein. | 0.569 |
eno | tpiA | SAMN04488020_11046 | SAMN04488020_101401 | Enolase; Catalyzes the reversible conversion of 2-phosphoglycerate into phosphoenolpyruvate. It is essential for the degradation of carbohydrates via glycolysis; Belongs to the enolase family. | Triosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family. | 0.991 |
kdsD | SFG36663.1 | SAMN04488020_11471 | SAMN04488020_10212 | Arabinose-5-phosphate isomerase; Belongs to the SIS family. GutQ/KpsF subfamily. | Conserved hypothetical protein. | 0.628 |
kdsD | algA | SAMN04488020_11471 | SAMN04488020_11810 | Arabinose-5-phosphate isomerase; Belongs to the SIS family. GutQ/KpsF subfamily. | Mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase; Belongs to the mannose-6-phosphate isomerase type 2 family. | 0.426 |
kdsD | tpiA | SAMN04488020_11471 | SAMN04488020_101401 | Arabinose-5-phosphate isomerase; Belongs to the SIS family. GutQ/KpsF subfamily. | Triosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family. | 0.587 |
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