STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFG41366.1Hypothetical protein. (134 aa)    
Predicted Functional Partners:
hin_1
Site-specific DNA recombinase.
     0.980
SFG41306.1
Protein of unknown function.
 
     0.960
SFG41078.1
ParB-like nuclease domain-containing protein.
  
     0.750
SFG41272.1
Phage/plasmid primase, P4 family, C-terminal domain-containing protein.
 
     0.701
dpnA_2
Phage terminase, small subunit, putative, P27 family; Belongs to the N(4)/N(6)-methyltransferase family.
  
     0.654
queC
7-cyano-7-deazaguanine synthase (queuosine biosynthesis).
 
     0.496
dpnA_1
Adenine-specific DNA-methyltransferase.
 
     0.490
SFG41489.1
Type III restriction enzyme.
 
    0.467
SFG41244.1
Hypothetical protein.
       0.450
SFH26506.1
cation:H+ antiporter.
  
     0.444
Your Current Organism:
Palleronia marisminoris
NCBI taxonomy Id: 315423
Other names: CECT 7066, LMG 22959, LMG:22959, P. marisminoris, Palleronia marisminoris Martinez-Checa et al. 2005 emend. Albuquerque et al. 2015, strain B33
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