STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFG50756.1Transcriptional regulator, MarR family. (167 aa)    
Predicted Functional Partners:
fliP
Flagellar biosynthetic protein FliP; Plays a role in the flagellum-specific transport system. Belongs to the FliP/MopC/SpaP family.
   
    0.923
SFH15349.1
DNA protecting protein DprA.
   
    0.823
SFG50720.1
Antitoxin CptB.
 
     0.797
SFH43817.1
Hypothetical protein.
  
     0.728
SFH05121.1
comF family protein.
  
    0.716
immR
Transcriptional regulator, contains XRE-family HTH domain.
   
   0.696
dosC
Diguanylate cyclase (GGDEF) domain-containing protein.
   
  
 0.666
flgH
Flagellar L-ring protein precursor FlgH; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.
  
    0.620
SFH07014.1
Hypothetical protein.
  
     0.620
fliN
Flagellar motor switch protein FliN/FliY.
  
    0.617
Your Current Organism:
Palleronia marisminoris
NCBI taxonomy Id: 315423
Other names: CECT 7066, LMG 22959, LMG:22959, P. marisminoris, Palleronia marisminoris Martinez-Checa et al. 2005 emend. Albuquerque et al. 2015, strain B33
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.