STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFG53046.1Protein of unknown function. (319 aa)    
Predicted Functional Partners:
SFG53120.1
5-bromo-4-chloroindolyl phosphate hydrolysis protein.
 
     0.957
SFG53086.1
Uncharacterized conserved protein YaaN involved in tellurite resistance; Belongs to the TelA family.
 
     0.894
SFG53166.1
Hypothetical protein.
       0.773
SFH43932.1
Hypothetical protein.
  
     0.734
SFH12817.1
Hypothetical protein.
  
     0.708
SFH14198.1
Hypothetical protein.
  
     0.706
rluB
23S rRNA pseudouridine2605 synthase; Belongs to the pseudouridine synthase RsuA family.
       0.704
SFH54242.1
Hypoxia induced protein conserved region.
  
     0.686
SFG05600.1
Hypothetical protein.
  
     0.682
SFG21763.1
Invasion protein IalB, involved in pathogenesis.
  
     0.661
Your Current Organism:
Palleronia marisminoris
NCBI taxonomy Id: 315423
Other names: CECT 7066, LMG 22959, LMG:22959, P. marisminoris, Palleronia marisminoris Martinez-Checa et al. 2005 emend. Albuquerque et al. 2015, strain B33
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