STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFG38733.1Putative tricarboxylic transport membrane protein. (505 aa)    
Predicted Functional Partners:
SFG38802.1
Tripartite-type tricarboxylate transporter, receptor component TctC.
 
    0.938
SFH32511.1
Tripartite-type tricarboxylate transporter, receptor component TctC.
 
    0.858
SFG93710.1
Putative tricarboxylic transport membrane protein.
 
    0.856
SFH08646.1
Tripartite-type tricarboxylate transporter, receptor component TctC.
 
    0.842
SFG38763.1
Tripartite tricarboxylate transporter TctB family protein.
       0.773
SFG93735.1
Putative tricarboxylic transport membrane protein.
  
 
 0.577
SFH32494.1
Tripartite tricarboxylate transporter TctB family protein.
  
 
 0.555
SFH47040.1
Tripartite-type tricarboxylate transporter, receptor component TctC.
  
    0.409
SFG38551.1
Alpha/beta hydrolase family protein.
       0.403
oppF_1
Peptide/nickel transport system ATP-binding protein.
       0.403
Your Current Organism:
Palleronia marisminoris
NCBI taxonomy Id: 315423
Other names: CECT 7066, LMG 22959, LMG:22959, P. marisminoris, Palleronia marisminoris Martinez-Checa et al. 2005 emend. Albuquerque et al. 2015, strain B33
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.