STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
galRTranscriptional regulator, LacI family. (342 aa)    
Predicted Functional Partners:
gltB_1
Glutamate synthase (NADPH) large subunit.
    
 
 0.944
ptsO
Phosphocarrier protein.
   
 
 0.853
chbP
Cellobionic acid phosphorylase.
 
  
 0.769
treS_2
Maltose alpha-D-glucosyltransferase/ alpha-amylase.
   
 
  0.608
degA
LacI family transcriptional regulator.
  
 
  0.592
sat
Sulfate adenylyltransferase; Catalyzes the synthesis of activated sulfate.
   
 
 0.581
rbsK
Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway.
 
 0.551
SFG68863.1
Carbohydrate ABC transporter substrate-binding protein, CUT1 family.
 
     0.550
rpfC
PAS domain S-box-containing protein.
    
 
 0.529
guaA_1
GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP.
    
   0.480
Your Current Organism:
Palleronia marisminoris
NCBI taxonomy Id: 315423
Other names: CECT 7066, LMG 22959, LMG:22959, P. marisminoris, Palleronia marisminoris Martinez-Checa et al. 2005 emend. Albuquerque et al. 2015, strain B33
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.