STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFG72213.1Protein of unknown function. (168 aa)    
Predicted Functional Partners:
SFG72075.1
Hypothetical protein.
 
     0.864
SFG72175.1
Amino acid/amide ABC transporter substrate-binding protein, HAAT family.
 
     0.814
ybhR
ABC-2 type transport system permease protein.
 
     0.804
ybhF
ABC-2 type transport system ATP-binding protein.
 
     0.782
SFG72326.1
NitT/TauT family transport system substrate-binding protein.
 
     0.776
cycB
C-type cytochrome, methanol metabolism-related.
 
     0.774
SFG72009.1
Quinoprotein dehydrogenase-associated probable ABC transporter substrate-binding protein.
 
     0.774
SFG72039.1
PQQ-dependent catabolism-associated CXXCW motif protein.
  
     0.768
SFG71882.1
Sulfur-oxidizing protein SoxY.
 
     0.767
SFG71858.1
Hypothetical protein.
  
     0.765
Your Current Organism:
Palleronia marisminoris
NCBI taxonomy Id: 315423
Other names: CECT 7066, LMG 22959, LMG:22959, P. marisminoris, Palleronia marisminoris Martinez-Checa et al. 2005 emend. Albuquerque et al. 2015, strain B33
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.