STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFG64475.1Transcriptional regulator, contains Arc/MetJ-type RHH (ribbon-helix-helix) DNA-binding domain. (138 aa)    
Predicted Functional Partners:
SFG64503.1
Esterase, PHB depolymerase family.
 
     0.929
SFH36840.1
Esterase, PHB depolymerase family.
 
     0.794
cobB_1
NAD-dependent deacetylase; Belongs to the sirtuin family. Class III subfamily.
   
    0.634
SFG64443.1
Nucleotide-binding universal stress protein, UspA family.
       0.523
dauA
Sulfate permease, SulP family.
       0.504
yvoA
Transcriptional regulator, GntR family.
   
    0.408
yjjM
DNA-binding transcriptional regulator, GntR family.
   
    0.408
SFG11457.1
Hypothetical protein.
  
     0.401
Your Current Organism:
Palleronia marisminoris
NCBI taxonomy Id: 315423
Other names: CECT 7066, LMG 22959, LMG:22959, P. marisminoris, Palleronia marisminoris Martinez-Checa et al. 2005 emend. Albuquerque et al. 2015, strain B33
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.