Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFG84153.1 | SFG84219.1 | SAMN04488020_104159 | SAMN04488020_104161 | Hypothetical protein; Belongs to the UPF0246 family. | YggT family protein. | 0.665 |
SFG84153.1 | SFG84250.1 | SAMN04488020_104159 | SAMN04488020_104162 | Hypothetical protein; Belongs to the UPF0246 family. | Acyl-CoA thioesterase FadM. | 0.462 |
SFG84153.1 | mepA_1 | SAMN04488020_104159 | SAMN04488020_104164 | Hypothetical protein; Belongs to the UPF0246 family. | Penicillin-insensitive murein endopeptidase. | 0.409 |
SFG84153.1 | mnmC | SAMN04488020_104159 | SAMN04488020_104111 | Hypothetical protein; Belongs to the UPF0246 family. | tRNA U34 5-methylaminomethyl-2-thiouridine-forming methyltransferase MnmC. | 0.514 |
SFG84153.1 | recQ | SAMN04488020_104159 | SAMN04488020_104160 | Hypothetical protein; Belongs to the UPF0246 family. | ATP-dependent DNA helicase RecQ. | 0.763 |
SFG84153.1 | ribD | SAMN04488020_104159 | SAMN04488020_101331 | Hypothetical protein; Belongs to the UPF0246 family. | Diaminohydroxyphosphoribosylaminopyrimidine deaminase; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family. | 0.436 |
SFG84153.1 | yejE | SAMN04488020_104159 | SAMN04488020_10496 | Hypothetical protein; Belongs to the UPF0246 family. | Microcin C transport system permease protein. | 0.516 |
SFG84219.1 | SFG84153.1 | SAMN04488020_104161 | SAMN04488020_104159 | YggT family protein. | Hypothetical protein; Belongs to the UPF0246 family. | 0.665 |
SFG84219.1 | SFG84250.1 | SAMN04488020_104161 | SAMN04488020_104162 | YggT family protein. | Acyl-CoA thioesterase FadM. | 0.770 |
SFG84219.1 | mepA_1 | SAMN04488020_104161 | SAMN04488020_104164 | YggT family protein. | Penicillin-insensitive murein endopeptidase. | 0.651 |
SFG84219.1 | recQ | SAMN04488020_104161 | SAMN04488020_104160 | YggT family protein. | ATP-dependent DNA helicase RecQ. | 0.727 |
SFG84250.1 | SFG84153.1 | SAMN04488020_104162 | SAMN04488020_104159 | Acyl-CoA thioesterase FadM. | Hypothetical protein; Belongs to the UPF0246 family. | 0.462 |
SFG84250.1 | SFG84219.1 | SAMN04488020_104162 | SAMN04488020_104161 | Acyl-CoA thioesterase FadM. | YggT family protein. | 0.770 |
SFG84250.1 | mepA_1 | SAMN04488020_104162 | SAMN04488020_104164 | Acyl-CoA thioesterase FadM. | Penicillin-insensitive murein endopeptidase. | 0.751 |
SFG84250.1 | recQ | SAMN04488020_104162 | SAMN04488020_104160 | Acyl-CoA thioesterase FadM. | ATP-dependent DNA helicase RecQ. | 0.612 |
mepA_1 | SFG84153.1 | SAMN04488020_104164 | SAMN04488020_104159 | Penicillin-insensitive murein endopeptidase. | Hypothetical protein; Belongs to the UPF0246 family. | 0.409 |
mepA_1 | SFG84219.1 | SAMN04488020_104164 | SAMN04488020_104161 | Penicillin-insensitive murein endopeptidase. | YggT family protein. | 0.651 |
mepA_1 | SFG84250.1 | SAMN04488020_104164 | SAMN04488020_104162 | Penicillin-insensitive murein endopeptidase. | Acyl-CoA thioesterase FadM. | 0.751 |
mepA_1 | recQ | SAMN04488020_104164 | SAMN04488020_104160 | Penicillin-insensitive murein endopeptidase. | ATP-dependent DNA helicase RecQ. | 0.485 |
mnmC | SFG84153.1 | SAMN04488020_104111 | SAMN04488020_104159 | tRNA U34 5-methylaminomethyl-2-thiouridine-forming methyltransferase MnmC. | Hypothetical protein; Belongs to the UPF0246 family. | 0.514 |
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