Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFG48205.1 | metG_2 | SAMN04488020_102349 | SAMN04488020_10458 | Drug/metabolite transporter, DME family. | tRNA-binding protein. | 0.519 |
SFG80593.1 | metG_2 | SAMN04488020_10461 | SAMN04488020_10458 | Hypothetical protein. | tRNA-binding protein. | 0.592 |
SFG80593.1 | proC | SAMN04488020_10461 | SAMN04488020_10459 | Hypothetical protein. | Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline. | 0.450 |
gltB_1 | guaA_1 | SAMN04488020_105177 | SAMN04488020_10132 | Glutamate synthase (NADPH) large subunit. | GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP. | 0.950 |
gltB_1 | metG_2 | SAMN04488020_105177 | SAMN04488020_10458 | Glutamate synthase (NADPH) large subunit. | tRNA-binding protein. | 0.606 |
gltB_1 | polA | SAMN04488020_105177 | SAMN04488020_10469 | Glutamate synthase (NADPH) large subunit. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.594 |
gltB_1 | proC | SAMN04488020_105177 | SAMN04488020_10459 | Glutamate synthase (NADPH) large subunit. | Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline. | 0.552 |
guaA_1 | gltB_1 | SAMN04488020_10132 | SAMN04488020_105177 | GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP. | Glutamate synthase (NADPH) large subunit. | 0.950 |
guaA_1 | leuS | SAMN04488020_10132 | SAMN04488020_104257 | GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP. | leucyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. | 0.598 |
guaA_1 | metG_1 | SAMN04488020_10132 | SAMN04488020_101604 | GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP. | methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation. | 0.702 |
guaA_1 | metG_2 | SAMN04488020_10132 | SAMN04488020_10458 | GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP. | tRNA-binding protein. | 0.552 |
guaA_1 | pheS | SAMN04488020_10132 | SAMN04488020_10731 | GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP. | phenylalanyl-tRNA synthetase, alpha subunit; Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily. | 0.617 |
guaA_1 | polA | SAMN04488020_10132 | SAMN04488020_10469 | GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.799 |
guaA_1 | preA | SAMN04488020_10132 | SAMN04488020_11225 | GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP. | Dihydrouracil dehydrogenase (NAD+). | 0.923 |
guaA_1 | proC | SAMN04488020_10132 | SAMN04488020_10459 | GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP. | Pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline. | 0.535 |
leuS | guaA_1 | SAMN04488020_104257 | SAMN04488020_10132 | leucyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. | GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP. | 0.598 |
leuS | metG_1 | SAMN04488020_104257 | SAMN04488020_101604 | leucyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. | methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation. | 0.994 |
leuS | metG_2 | SAMN04488020_104257 | SAMN04488020_10458 | leucyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. | tRNA-binding protein. | 0.514 |
leuS | pheS | SAMN04488020_104257 | SAMN04488020_10731 | leucyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. | phenylalanyl-tRNA synthetase, alpha subunit; Belongs to the class-II aminoacyl-tRNA synthetase family. Phe-tRNA synthetase alpha subunit type 1 subfamily. | 0.573 |
leuS | polA | SAMN04488020_104257 | SAMN04488020_10469 | leucyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.646 |
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