STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFG92769.1Aldehyde dehydrogenase family protein. (338 aa)    
Predicted Functional Partners:
gltB_1
Glutamate synthase (NADPH) large subunit.
  
 
 0.828
dapA_4
4-hydroxy-tetrahydrodipicolinate synthase; Belongs to the DapA family.
  
 
  0.786
proA_3
Regulator of RNase E activity RraA.
       0.773
putA
L-proline dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.
  
 0.691
scpA_1
methylmalonyl-CoA mutase.
     
 0.634
araD
4-hydroxy-tetrahydrodipicolinate synthase; Belongs to the DapA family.
  
 
  0.633
gltA
Citrate synthase; Belongs to the citrate synthase family.
   
 0.621
pckA
Phosphoenolpyruvate carboxykinase (ATP); Involved in the gluconeogenesis. Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP) through direct phosphoryl transfer between the nucleoside triphosphate and OAA.
   
 
 0.620
maeB_1
Malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+).
  
 
 0.595
tme
Malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+).
  
 
 0.595
Your Current Organism:
Palleronia marisminoris
NCBI taxonomy Id: 315423
Other names: CECT 7066, LMG 22959, LMG:22959, P. marisminoris, Palleronia marisminoris Martinez-Checa et al. 2005 emend. Albuquerque et al. 2015, strain B33
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