STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rbsA_8Monosaccharide ABC transporter ATP-binding protein, CUT2 family (TC 3.A.1.2.-). (263 aa)    
Predicted Functional Partners:
alsB
Ribose transport system substrate-binding protein.
  0.945
rbsC_6
Monosaccharide ABC transporter membrane protein, CUT2 family; Belongs to the binding-protein-dependent transport system permease family.
  0.927
xylH_1
D-xylose transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
 0.918
xylF_1
Xylose-binding protein.
 
 0.907
livH_2
Branched-chain amino acid transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
 
   
  0.905
yjjN
2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase.
 
    0.817
xylH_2
Multiple monosaccharide ABC transporter membrane protein; Belongs to the binding-protein-dependent transport system permease family.
 
 0.770
garD
Altronate hydrolase.
  
    0.767
SFH00122.1
2-keto-3-deoxy-L-fuconate dehydrogenase.
 
     0.754
rbsC_3
Monosaccharide ABC transporter membrane protein, CUT2 family; Belongs to the binding-protein-dependent transport system permease family.
  0.746
Your Current Organism:
Palleronia marisminoris
NCBI taxonomy Id: 315423
Other names: CECT 7066, LMG 22959, LMG:22959, P. marisminoris, Palleronia marisminoris Martinez-Checa et al. 2005 emend. Albuquerque et al. 2015, strain B33
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.