STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFG93377.1Xanthine dehydrogenase accessory factor. (289 aa)    
Predicted Functional Partners:
mop
Xanthine dehydrogenase, molybdenum binding subunit apoprotein.
  
 0.982
pucE
Xanthine dehydrogenase small subunit.
 
  
 0.960
xdhA_1
Xanthine dehydrogenase, molybdenum binding subunit apoprotein.
  
 0.918
guaD_2
Guanine deaminase; Catalyzes the hydrolytic deamination of guanine, producing xanthine and ammonia; Belongs to the metallo-dependent hydrolases superfamily. ATZ/TRZ family.
 
    0.857
SFG93355.1
Putative MFS transporter, AGZA family, xanthine/uracil permease.
 
     0.844
cdhC_1
Xanthine dehydrogenase small subunit.
 
  
 0.807
hcrB
Xanthine dehydrogenase YagS FAD-binding subunit.
  
 
 0.716
SFG09110.1
CTP:molybdopterin cytidylyltransferase MocA.
  
 
 0.627
dmlR_4
DNA-binding transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
 
     0.594
SFG93018.1
Uncharacterized membrane protein.
 
     0.547
Your Current Organism:
Palleronia marisminoris
NCBI taxonomy Id: 315423
Other names: CECT 7066, LMG 22959, LMG:22959, P. marisminoris, Palleronia marisminoris Martinez-Checa et al. 2005 emend. Albuquerque et al. 2015, strain B33
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