STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ytfTSimple sugar transport system permease protein; Belongs to the binding-protein-dependent transport system permease family. (343 aa)    
Predicted Functional Partners:
ytfQ
Simple sugar transport system substrate-binding protein.
  0.979
rbsA_7
Simple sugar transport system ATP-binding protein.
  0.977
yjfF
Simple sugar transport system permease protein; Belongs to the binding-protein-dependent transport system permease family.
    
0.949
rbsB_2
Ribose transport system substrate-binding protein.
 
  0.940
xylG
Multiple monosaccharide ABC transporter ATP-binding protein.
  0.859
rbsA_2
Rhamnose ABC transporter ATP-binding protein; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.
  0.825
alsB
Ribose transport system substrate-binding protein.
 
  0.825
pdhR
DNA-binding transcriptional regulator, FadR family.
 
     0.808
rbsA_5
Ribose transport system ATP-binding protein.
  0.798
rbsA_9
Monosaccharide ABC transporter ATP-binding protein, CUT2 family.
 
  0.735
Your Current Organism:
Palleronia marisminoris
NCBI taxonomy Id: 315423
Other names: CECT 7066, LMG 22959, LMG:22959, P. marisminoris, Palleronia marisminoris Martinez-Checa et al. 2005 emend. Albuquerque et al. 2015, strain B33
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.