STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFH17802.1Hypothetical protein. (262 aa)    
Predicted Functional Partners:
algA
Mannose-1-phosphate guanylyltransferase / mannose-6-phosphate isomerase; Belongs to the mannose-6-phosphate isomerase type 2 family.
   
 0.874
tktA
Transketolase; Belongs to the transketolase family.
  
 
 0.819
SFG15671.1
Flp pilus assembly protein TadG.
  
    0.775
minD_2
Pilus assembly protein CpaE.
  
    0.759
SFH34093.1
Hypothetical protein.
  
     0.755
SFG80182.1
Putative peptidoglycan binding domain-containing protein.
  
    0.732
SFG21012.1
AsmA-like C-terminal region.
  
     0.719
SFH37337.1
Hypothetical protein.
  
     0.713
mmgB
3-hydroxyacyl-CoA dehydrogenase.
  
    0.712
SFG15640.1
Putative Flp pilus-assembly TadE/G-like.
  
    0.710
Your Current Organism:
Palleronia marisminoris
NCBI taxonomy Id: 315423
Other names: CECT 7066, LMG 22959, LMG:22959, P. marisminoris, Palleronia marisminoris Martinez-Checa et al. 2005 emend. Albuquerque et al. 2015, strain B33
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.