STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFH14198.1Hypothetical protein. (333 aa)    
Predicted Functional Partners:
SFG24205.1
Hypothetical protein.
  
     0.773
SFH43423.1
Hypothetical protein.
  
     0.772
SFG47298.1
Membrane associated serine protease, rhomboid family.
  
     0.770
SFG18008.1
Protein RodZ, contains Xre-like HTH and DUF4115 domains.
  
     0.768
SFH12817.1
Hypothetical protein.
  
     0.765
SFH20748.1
Hypothetical protein.
  
     0.763
SFG48750.1
Hypothetical protein.
  
     0.760
SFG05600.1
Hypothetical protein.
  
     0.758
SFH13714.1
Hypothetical protein.
  
     0.758
SFH34093.1
Hypothetical protein.
  
     0.757
Your Current Organism:
Palleronia marisminoris
NCBI taxonomy Id: 315423
Other names: CECT 7066, LMG 22959, LMG:22959, P. marisminoris, Palleronia marisminoris Martinez-Checa et al. 2005 emend. Albuquerque et al. 2015, strain B33
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.