STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFH28581.1Hypothetical protein. (175 aa)    
Predicted Functional Partners:
exbD
Cell division and transport-associated protein TolR (TC 2.C.1.2.1).
  
 
 0.934
SFH43535.1
Outer membrane transport energization protein ExbD.
 
 
 0.933
pfeA
Outer membrane receptor for ferrienterochelin and colicins.
  
 
 0.889
exbB_1
Cell division and transport-associated protein TolQ; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
  
 
 0.887
SFH43517.1
Biopolymer transport protein ExbD.
 
 
 0.874
exbB_2
Outer membrane transport energization protein ExbB (TC 2.C.1.1.1).
  
 
 0.866
SFG11099.1
Hypothetical protein.
   
    0.737
tolB
TolB protein; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
   
 
 0.700
SFH43423.1
Hypothetical protein.
  
     0.681
SFG05600.1
Hypothetical protein.
  
    0.653
Your Current Organism:
Palleronia marisminoris
NCBI taxonomy Id: 315423
Other names: CECT 7066, LMG 22959, LMG:22959, P. marisminoris, Palleronia marisminoris Martinez-Checa et al. 2005 emend. Albuquerque et al. 2015, strain B33
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.