STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFH27141.1Indolepyruvate ferredoxin oxidoreductase alpha subunit. (714 aa)    
Predicted Functional Partners:
SFH27158.1
Indolepyruvate ferredoxin oxidoreductase beta subunit.
 
 0.987
sdhA
Succinate dehydrogenase subunit A; Belongs to the FAD-dependent oxidoreductase 2 family. FRD/SDH subfamily.
  
 0.947
sat
Sulfate adenylyltransferase; Catalyzes the synthesis of activated sulfate.
  
 
 0.930
gltB_1
Glutamate synthase (NADPH) large subunit.
     
 0.891
SFH27122.1
DNA-binding transcriptional regulator, MarR family.
 
     0.891
hndC
NAD-dependent formate dehydrogenase flavoprotein subunit.
    
 0.876
SFH27106.1
Kynurenine formamidase.
 
     0.859
scpA_1
methylmalonyl-CoA mutase.
    
  0.785
preA
Dihydrouracil dehydrogenase (NAD+).
    
  0.769
nqo3
NADH dehydrogenase subunit G; NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. Belongs to the complex I 75 kDa subunit family.
    
 0.479
Your Current Organism:
Palleronia marisminoris
NCBI taxonomy Id: 315423
Other names: CECT 7066, LMG 22959, LMG:22959, P. marisminoris, Palleronia marisminoris Martinez-Checa et al. 2005 emend. Albuquerque et al. 2015, strain B33
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