STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFH27197.1N-acyl homoserine lactone hydrolase. (252 aa)    
Predicted Functional Partners:
SFH27177.1
Hypothetical protein.
 
     0.891
vjbR
DNA-binding transcriptional regulator, CsgD family.
    
 
 0.873
SFH31887.1
Hypothetical protein.
  
  0.644
SFH27215.1
3-oxoacyl-[acyl-carrier protein] reductase.
  
 
  0.622
gloB_1
Hydroxyacylglutathione hydrolase; Thiolesterase that catalyzes the hydrolysis of S-D-lactoyl- glutathione to form glutathione and D-lactic acid.
     
 0.522
gloA_2
Lactoylglutathione lyase.
  
  
 0.498
SFG21944.1
Uncharacterized conserved protein YcbK, DUF882 family.
  
    0.497
SFG94064.1
Uncharacterized conserved protein YcbK, DUF882 family.
  
    0.497
SFH29393.1
Uncharacterized conserved protein YcbK, DUF882 family.
  
    0.497
gcvT_1
Sarcosine oxidase subunit alpha; Belongs to the GcvT family.
  
 
  0.493
Your Current Organism:
Palleronia marisminoris
NCBI taxonomy Id: 315423
Other names: CECT 7066, LMG 22959, LMG:22959, P. marisminoris, Palleronia marisminoris Martinez-Checa et al. 2005 emend. Albuquerque et al. 2015, strain B33
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.