STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFH27675.1Chromosome partitioning protein, ParB family. (692 aa)    
Predicted Functional Partners:
SFH27693.1
Methyltransferase domain-containing protein.
 
     0.897
SFH27659.1
Protein of unknown function.
 
     0.886
SFH27571.1
Antirestriction protein ArdC.
 
     0.827
SFH27871.1
Protein of unknown function.
 
     0.793
SFH28444.1
Hypothetical protein.
  
     0.772
SFH28427.1
Hypothetical protein.
  
     0.769
SFH28411.1
TrbC/VIRB2 family protein.
  
     0.756
SFH28165.1
Relaxase/Mobilisation nuclease domain-containing protein.
  
     0.752
SFH28129.1
Cellulose biosynthesis protein BcsQ.
  
   0.745
SFH28206.1
Type IV secretion system protein VirB6.
  
     0.745
Your Current Organism:
Palleronia marisminoris
NCBI taxonomy Id: 315423
Other names: CECT 7066, LMG 22959, LMG:22959, P. marisminoris, Palleronia marisminoris Martinez-Checa et al. 2005 emend. Albuquerque et al. 2015, strain B33
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.