STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFH37472.1Acetyltransferase (GNAT) domain-containing protein. (283 aa)    
Predicted Functional Partners:
cphA
Cyanophycin synthetase.
    
 0.700
malK_7
Maltose/maltodextrin import ATP-binding protein MalK; Maltose ABC transporter ATP-binding protein/trehalose ABC transporter ATP-binding protein/sucrose ABC transporter ATP-binding protein.
       0.661
malL_4
Alpha-glucosidase.
       0.631
sugB_4
Maltose ABC transporter membrane protein.
       0.631
lacF_6
Maltose ABC transporter membrane protein.
       0.631
SFG95939.1
Flagellar assembly protein FliH.
  
     0.585
SFG95460.1
Flagellar hook-basal body complex protein FliE.
  
 
   0.526
SFG95746.1
Hypothetical protein.
  
     0.519
SFG95069.1
Flagellar hook-length control protein FliK.
  
     0.473
murE
UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase; Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan. Belongs to the MurCDEF family. MurE subfamily.
    
 0.469
Your Current Organism:
Palleronia marisminoris
NCBI taxonomy Id: 315423
Other names: CECT 7066, LMG 22959, LMG:22959, P. marisminoris, Palleronia marisminoris Martinez-Checa et al. 2005 emend. Albuquerque et al. 2015, strain B33
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