STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFH37981.1Opacity protein. (245 aa)    
Predicted Functional Partners:
SFG08355.1
Periplasmic chaperone for outer membrane proteins Skp.
    
 
 0.748
SFG98196.1
Hypothetical protein.
  
     0.515
cysS
cysteinyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
       0.503
SFH37936.1
Squalene/phytoene synthase.
       0.501
leuA_2
2-isopropylmalate synthase; Belongs to the alpha-IPM synthase/homocitrate synthase family.
       0.501
SFG12980.1
OmpA family protein.
  
   0.486
SFH54266.1
SH3 domain-containing protein.
  
     0.430
SFG66076.1
Hypothetical protein.
   
    0.426
SFH37998.1
Opacity protein.
 
    
0.426
pdtaR_2
CheY chemotaxis protein or a CheY-like REC (receiver) domain.
  
   
 0.421
Your Current Organism:
Palleronia marisminoris
NCBI taxonomy Id: 315423
Other names: CECT 7066, LMG 22959, LMG:22959, P. marisminoris, Palleronia marisminoris Martinez-Checa et al. 2005 emend. Albuquerque et al. 2015, strain B33
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.