Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SFG06485.1 | SFG99280.1 | SAMN04488020_10151 | SAMN04488020_105247 | Yip1 domain-containing protein. | Hypothetical protein. | 0.537 |
SFG06485.1 | SFH39792.1 | SAMN04488020_10151 | SAMN04488020_11242 | Yip1 domain-containing protein. | Ceramidase. | 0.482 |
SFG06485.1 | SFH39856.1 | SAMN04488020_10151 | SAMN04488020_11245 | Yip1 domain-containing protein. | Hypothetical protein. | 0.426 |
SFG99280.1 | SFG06485.1 | SAMN04488020_105247 | SAMN04488020_10151 | Hypothetical protein. | Yip1 domain-containing protein. | 0.537 |
SFG99280.1 | SFH39792.1 | SAMN04488020_105247 | SAMN04488020_11242 | Hypothetical protein. | Ceramidase. | 0.615 |
SFH15973.1 | SFH39792.1 | SAMN04488020_107156 | SAMN04488020_11242 | CAAX protease self-immunity. | Ceramidase. | 0.556 |
SFH39775.1 | SFH39792.1 | SAMN04488020_11241 | SAMN04488020_11242 | MOSC domain-containing protein. | Ceramidase. | 0.601 |
SFH39775.1 | aiiA | SAMN04488020_11241 | SAMN04488020_11240 | MOSC domain-containing protein. | Glyoxylase, beta-lactamase superfamily II. | 0.541 |
SFH39775.1 | gatA_2 | SAMN04488020_11241 | SAMN04488020_11244 | MOSC domain-containing protein. | aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu- tRNA(Gln). | 0.428 |
SFH39775.1 | gatC | SAMN04488020_11241 | SAMN04488020_11243 | MOSC domain-containing protein. | aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatC family. | 0.519 |
SFH39792.1 | SFG06485.1 | SAMN04488020_11242 | SAMN04488020_10151 | Ceramidase. | Yip1 domain-containing protein. | 0.482 |
SFH39792.1 | SFG99280.1 | SAMN04488020_11242 | SAMN04488020_105247 | Ceramidase. | Hypothetical protein. | 0.615 |
SFH39792.1 | SFH15973.1 | SAMN04488020_11242 | SAMN04488020_107156 | Ceramidase. | CAAX protease self-immunity. | 0.556 |
SFH39792.1 | SFH39775.1 | SAMN04488020_11242 | SAMN04488020_11241 | Ceramidase. | MOSC domain-containing protein. | 0.601 |
SFH39792.1 | SFH39856.1 | SAMN04488020_11242 | SAMN04488020_11245 | Ceramidase. | Hypothetical protein. | 0.659 |
SFH39792.1 | aiiA | SAMN04488020_11242 | SAMN04488020_11240 | Ceramidase. | Glyoxylase, beta-lactamase superfamily II. | 0.431 |
SFH39792.1 | folE2 | SAMN04488020_11242 | SAMN04488020_105262 | Ceramidase. | GTP cyclohydrolase I. | 0.438 |
SFH39792.1 | gatA_2 | SAMN04488020_11242 | SAMN04488020_11244 | Ceramidase. | aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit A; Allows the formation of correctly charged Gln-tRNA(Gln) through the transamidation of misacylated Glu-tRNA(Gln) in organisms which lack glutaminyl-tRNA synthetase. The reaction takes place in the presence of glutamine and ATP through an activated gamma-phospho-Glu- tRNA(Gln). | 0.697 |
SFH39792.1 | gatC | SAMN04488020_11242 | SAMN04488020_11243 | Ceramidase. | aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C; Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp-tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl- tRNA or glutaminyl-tRNA synthetases. The reaction takes place in the presence of glutamine and ATP through an activated phospho-Asp- tRNA(Asn) or phospho-Glu-tRNA(Gln); Belongs to the GatC family. | 0.791 |
SFH39856.1 | SFG06485.1 | SAMN04488020_11245 | SAMN04488020_10151 | Hypothetical protein. | Yip1 domain-containing protein. | 0.426 |
page 1 of 2