STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SFH43817.1Hypothetical protein. (175 aa)    
Predicted Functional Partners:
SFG50756.1
Transcriptional regulator, MarR family.
  
     0.728
SFG45525.1
TIGR02300 family protein.
  
    0.702
SFH06835.1
HemY protein.
  
     0.675
SFH06540.1
Predicted lipid-binding transport protein, Tim44 family.
  
     0.660
SFH23382.1
Hypothetical protein.
  
     0.624
SFG82167.1
Hypothetical protein.
  
     0.610
SFH13729.1
TIGR02302 family protein.
  
     0.607
SFG79430.1
Tellurite resistance protein TerB.
  
     0.605
SFH06884.1
uroporphyrinogen-III synthase.
  
     0.601
dnaJ_1
DnaJ domain-containing protein.
  
     0.596
Your Current Organism:
Palleronia marisminoris
NCBI taxonomy Id: 315423
Other names: CECT 7066, LMG 22959, LMG:22959, P. marisminoris, Palleronia marisminoris Martinez-Checa et al. 2005 emend. Albuquerque et al. 2015, strain B33
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.